Lecture materials and links
Keep monitoring this page, as material may be updated here.
Panopto: https://panopto.ut.ee/ -> (log into courses to see link)
Loengud
Lecture 1: Introduction and fast forward PDF
Overview of class, logistics, discussion of project ideas
Lecture 2: Introduction of Bioimaging PDF
Multicellular organisms, evolution, mutation, microscopy, 3D image Reconstruction, ML Pipeline for Bioimaging
Lecture 3: Light Optics and Imaging PDF
Ray optics, aperture, depth of field, exposure, sensor, noise
Lecture 4: Foundations of Machine Learning PDF
Imaging, Statistical Machine Learning
Lecture 5: Computer Vision PDF
Lecture 6: Learning through Backpropagation PDF
Lecture 7: CNN and Families PDF
Lecture 8: Recurrent Neural Networks PDF
Lecture 9: Transformer Neural Networks PDF
Lecture 10: Advance Architectures I PDF
Lecture 11: Advance Architectures II PDF
Lecture 12: Introduction to wave optics and deep optics
Free-space wave propagation, diffraction limit, end-to-end optimization of optics and image processing using AI
Lecture 13: Phase retrieval and holography
Phase retrieval, Fourier ptychography, computer-generated holography
Lecture 14: Guest Lecture
Time-of-flight, single-photon, and non-line-of-sight imaging
Lecture 15: Guest Lecture Imaging black holes
Lecture 16: Guest Lecture
Emerging sensor technology
Final Exam
Week 10: Final Project - Discussion
Week 11: Final Project - poster or video presentation (Group 1) Final Project - poster or video presentation (Group 2)
Week 12: Final Project - report and code