Bioinformatics Seminar 2017/18 spring

Schedule:

 Current state of schedule

19.02 – Opening + format + introduction

5.03 - Cufflinks vs StringTie

Presenters: Simona Micevska and Hristijan Sardjoski

Reviewers: Vladyslav Fediukov and Sander Tars

Articles:

• Method 1: Cufflinks
• Method 2: StringTie

19.03 - MISO vs LeafCutter

Presenters: Nurlan Kerimov and Châu Anh Nguyễn Thị

Reviewers: Simona Micevska and Hristijan Sardjoski

Articles:

• Method 1: LeafCutter (Châu Anh Nguyễn Thị)
• Method 2: MISO (Nurlan Kerimov)

2.04 - BSMAP vs BWA-meth

Presenters: Sander Tars vs Kaur Karus

Reviewers: Khatia Kilanava and Natia Doliashvili

Articles:

• Method 1: BSMAP (Kaur Karus)
• Method 2: BWA-meth (Sander Tars)

16.04 - DREME vs RSAT

Presenters: Vladyslav Fediukov and Sofiya Demchuk

Reviewers: Chau Anh and Kaur Karus

Articles:

• Method 1: DREME (Vladyslav Fediukov)
• Method 2: RSAT (Sofiya Demchuk)

14.05 - HISAT vs kallisto

Presenters: Khatia Kilanava and Natia Doliashvili

Reviewers: Muhammad Uzair and Mikhail Papkov

Articles:

• Method 1: HISAT (Khatia Kilanava)
• Method 2: kallisto (Natia Doliashvili)

21.05 - Image phenotypes

(Accurate Classification of Protein Subcellular Localization from High-Throughput Microscopy Images Using Deep Learning vs Automated analysis of high-content microscopy data with deep learning)

Presenters: Mikhail Papkov and Muhammad Uzair

Reviewers: Sofiya Demchuk and Nurlan Kerimov

Articles:

• Method 1: Accurate Classification of Protein Subcellular Localization from High-Throughput Microscopy Images Using Deep Learning (Mikhail Papkov)
• Method 2: Dermatologist-level classification of skin cancer with deep neural networks (Muhammad Uzair)